Publications
Sahu, N., Indic, B., Wong-Bajracharya, J., Merényi, Z., Ke, H.-M., Ahrendt, S., Monk, T.-L., Kocsubé, S., Drula, E., Lipzen, A., Bálint, B., Henrissat, B., Andreopoulos, B., Martin, F.M., Bugge Harder, C., Rigling, D., Ford, K.L., Foster, G.D., Pangilinan, J., Papanicolaou, A., Barry, K., LaButti, K., Virágh, M., Koriabine, M., Yan, M., Riley, R., Champramary, S., Plett, K.L., Grigoriev, I.V., Tsai, I.J., Slot, J., Sipos, G., Plett, J., Nagy, L.G., 2023. Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria. Nat Microbiol 8, 1668–1681. https://doi.org/10.1038/s41564-023-01448-1
Meyer, M., Slot, J., 2023. The evolution and ecology of psilocybin in nature. Fungal Genetics and Biology 167, 103812. https://doi.org/10.1016/j.fgb.2023.103812
Gluck-Thaler, E., Ralston, T., Konkel, Z., Ocampos, C.G., Ganeshan, V.D., Dorrance, A.E., Niblack, T.L., Wood, C.W., Slot, J.C., Lopez-Nicora, H.D., Vogan, A.A., 2022. Giant Starship Elements Mobilize Accessory Genes in Fungal Genomes. Molecular Biology and Evolution 39, msac109. https://doi.org/10.1093/molbev/msac109
Franco, M.E.E., Wisecaver, J.H., Arnold, A.E., Ju, Y.-M., Slot, J.C., Ahrendt, S., Moore, L.P., Eastman, K.E., Scott, K., Konkel, Z., Mondo, S.J., Kuo, A., Hayes, R.D., Haridas, S., Andreopoulos, B., Riley, R., LaButti, K., Pangilinan, J., Lipzen, A., Amirebrahimi, M., Yan, J., Adam, C., Keymanesh, K., Ng, V., Louie, K., Northen, T., Drula, E., Henrissat, B., Hsieh, H.-M., Youens-Clark, K., Lutzoni, F., Miadlikowska, J., Eastwood, D.C., Hamelin, R.C., Grigoriev, I.V., U’Ren, J.M., 2022. Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes. New Phytol 233, 1317–1330. https://doi.org/10.1111/nph.17873
Dunn, M.J., Shazib, S.U.A., Simonton, E., Slot, J.C., Anderson, M.Z., 2022. Architectural groups of a subtelomeric gene family evolve along distinct paths in Candida albicans. G3: Genes|Genomes|Genetics 12. https://doi.org/10.1093/g3journal/jkac283
Emanuel, I.B., Konkel, Z.M., Scott, K.L., Valero David, G.E., Slot, J.C., Peduto Hand, F., 2022. Whole-Genome Sequence Data for the Holotype Strain of Diaporthe ilicicola, a Fungus Associated with Latent Fruit Rot in Deciduous Holly. Microbiology Resource Announcements 11, e00631-22. https://doi.org/10.1128/mra.00631-22
Serrano, J., Smith, K.R., Crouch, A.L., Sharma, V., Yi, F., Vargova, V., LaMoia, T.E., Dupont, L.M., Serna, V., Tang, F., Gomes-Dias, L., Blakeslee, J.J., Hatzakis, E., Peterson, S.N., Anderson, M., Pratley, R.E., Kyriazis, G.A., 2021. High-dose saccharin supplementation does not induce gut microbiota changes or glucose intolerance in healthy humans and mice. Microbiome 9, 11. https://doi.org/10.1186/s40168-020-00976-w
Goughenour, K.D., Whalin, J., Slot, J.C., Rappleye, C.A., 2021. Diversification of Fungal Chitinases and Their Functional Differentiation in Histoplasma capsulatum. Molecular Biology and Evolution 38, 1339–1355. https://doi.org/10.1093/molbev/msaa293
Nastasi, N., Haines, S.R., Xu, L., da Silva, H., Divjan, A., Barnes, M.A., Rappleye, C.A., Perzanowski, M.S., Green, B.J., Dannemiller, K.C., 2020. Morphology and quantification of fungal growth in residential dust and carpets. Building and Environment 174, 106774. https://doi.org/10.1016/j.buildenv.2020.106774
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria (2023)
The evolution and ecology of psilocybin in nature (2022)
Giant Starship Elements Mobilize Accessory Genes in Fungal Genomes (2022)
Architectural groups of a subtelomeric gene family evolve along distinct paths in Candida albicans (2022)
Diversification of Fungal Chitinases and Their Functional Differentiation in Histoplasma capsulatum. (2021)
Morphology and quantification of fungal growth in residential dust and carpets (2020)